Toward an effective use of microalgae: a study on Chlamydomonas reinhardtii to disentangle non photochemical quenching (NPQ) and to engineer ketocarotenoids biosynthesis

Photosynthetic organisms can use solar energy to produce organic biomass starting from simple elements as CO2 and water, releasing oxygen as side product. Algae are characterized by high growth rate, extremely rapid life cycle and intrinsic high photosynthetic efficiency. Moreover, microalgae can also be cultivated in a mixed autotrophic/heterotrophic condition, using reduced carbon sources. Several algal strains are characterized by high lipid accumulation or production of high value compounds. Thus, algae not only represent a valid alternative to plants, but they also play a central role considering the sustainability related to their cultivation. Wastewaters and flue gas can be used to ensure nutrients and CO2 for carbon fixation, and, after biomass harvesting, water can be reused leading to a far lower consumption with respect to plants (especially in closed photobioreactor in which the evaporation is low). Unfortunately, algae evolved in conditions extremely different compared to actual industrial ones which involves 24/24 hours of high irradiance, strong shaking as well as high CO2 concentration: all these elements ensure high photosynthetic rate and thus high biomass accumulation but make necessary a domestication of strains. Since this need became evident, engineers, biologists and biotechnologists had tried to overcome algae cultivation limitations in order to became it feasible and economically useful. From a biotechnological point of view several targets could be pointed. Optimization of absorption/dissipation of light energy is one of the most interesting and explored. This thesis reports the use of several approaches to investigate the heat dissipation mechanisms (NPQ) in green algae, mainly focusing on the model organism Chlamydomonas reinhardtii. The results obtained reveal the molecular mechanisms of energy conversion from excitation energy into heat by the activity of specific pigment binding proteins called LHCSR (Light Harvesting Stress Related), going deep into details of the protein domains and pigments involved in the quenching process and the protein interaction network necessary for NPQ. In particular, the regulation of the accumulation of LHCSR proteins in Chlamydomonas reinhardtii revealed to be a successful genetic engineering strategy to improve biomass productivity. Among the possible application of microalgae, one of the most promising one is their use as green factories to produce high value products: here, we report the metabolic engineering of Chlamydomonas reinhardtii as a bio-factory for ketocarotenoids production. The use of microalgae as host to produce high value metabolites, represents, indeed, an effective way to break down costs related to their cultivation with a potential high impact into the market. Astaxanthin is, currently, produce using Haematococcus. lacustris (recently renamed from Haematococcus pluvialis) in which, its accumulation causes a stop in growth. For that reason, in this thesis effects of astaxanthin accumulation of H. lacustris was investigated. This thesis presents, with different approaches, a leap forward in microalgae domestication both trough enrichment of knowledge about NPQ and trough application of metabolic engineering to develop green bio-factories.