MARCOLUNGO, LUCA
MARCOLUNGO, LUCA
DIPARTIMENTO DI BIOTECNOLOGIE
?Nebbiolo? genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.)
2022-01-01 Maestri, S.; Gambino, G.; Lopatriello, G.; Minio, A.; Perrone, I.; Cosentino, E.; Giovannone, B.; Marcolungo, L.; Alfano, M.; Rombauts, S.; Cantu, D.; Rossato, M.; Delledonne, M.; Calder('o)n, L.
A Long-Read Sequencing Approach for Direct Haplotype Phasing in Clinical Settings
2020-01-01 Maestri, Simone; Maturo, Maria Giovanna; Cosentino, Emanuela; Marcolungo, Luca; Iadarola, Barbara; Fortunati, Elisabetta; Rossato, Marzia; Delledonne, Massimo
A Rapid and Accurate MinION-Based Workflow for Tracking Species Biodiversity in the Field
2019-01-01 Maestri, Simone; Cosentino, Emanuela; Paterno, Marta; Freitag, Hendrik; Garces, Jhoana M; Marcolungo, Luca; Alfano, Massimiliano; Njunjić, Iva; Schilthuizen, Menno; Slik, Ferry; Menegon, Michele; Rossato, Marzia; Delledonne, Massimo
ACoRE: Accurate SARS-CoV-2 genome reconstruction for the characterization of intra-host and inter-host viral diversity in clinical samples and for the evaluation of re-infections
2021-01-01 Marcolungo, Luca; Beltrami, Cristina; Degli Esposti, Chiara; Lopatriello, Giulia; Piubelli, Chiara; Mori, Antonio; Pomari, Elena; Deiana, Michela; Scarso, Salvatore; Bisoffi, Zeno; Grosso, Valentina; Cosentino, Emanuela; Maestri, Simone; Lavezzari, Denise; Iadarola, Barbara; Paterno, Marta; Segala, Elena; Giovannone, Barbara; Gallinaro, Martina; Rossato, Marzia; Delledonne, Massimo
Bioinformatics approaches for hybrid de novo genome assembly
2020-01-01 Marcolungo, Luca
Characterization of FMR1 Repeat Expansion and Intragenic Variants by Indirect Sequence Capture
2021-01-01 Grosso, Valentina; Marcolungo, Luca; Maestri, Simone; Alfano, Massimiliano; Lavezzari, Denise; Iadarola, Barbara; Salviati, Alessandro; Mariotti, Barbara; Botta, Annalisa; D'Apice, Maria Rosaria; Novelli, Giuseppe; Delledonne, Massimo; Rossato, Marzia
Chlorella vulgaris genome assembly and annotation reveals the molecular basis for metabolic acclimation to high light conditions
2019-01-01 Cecchin, Michela; Marcolungo, Luca; Rossato, Marzia; Girolomoni, Laura; Cosentino, Emanuela; Cuine, Stephan; Li‐beisson, Yonghua; Delledonne, Massimo; Ballottari, Matteo
CRISPR-Cas9-based repeat depletion for the high-throughput genotyping of complex plant genomes
2023-01-01 Rossato, Marzia; Marcolungo, Luca; DE ANTONI, Luca; Lopatriello, Giulia; Bellucci, Elisa; Cortinovis, Gaia; Frascarelli, Giulia; Nanni, Laura; Biotcchi, Elena; Di Vittori, Valerio; Vincenzi, Leonardo; Lucchini, Filippo; E Bett, Kirstin; Remsay, Larissa; Konkin, David; Delledonne, Massimo; Papa, Roberto
Genomic dissection of pod shattering in common bean: mutations at non-orthologous loci at the basis of convergent phenotypic evolution under domestication of leguminous species
2019-01-01 Rau, Domenico; Murgia, Maria L; Rodriguez, Monica; Bitocchi, Elena; Bellucci, Elisa; Fois, Davide; Albani, Diego; Nanni, Laura; Gioia, Tania; Santo, Debora; Marcolungo, Luca; Delledonne, Massimo; Attene, Giovanna; Papa, Roberto
Genomic structural variation in Nebbiolo grapevines at the individual, clonal and cultivar levels
2020-01-01 Maestri, Simone; Gambino, Giorgio; Minio, Andrea; Perrone, Irene; Cosentino, Emanuela; Giovannone, Barbara; Lopatriello, Giulia; Marcolungo, Luca; Cantu, Dario; Rossato, Marzia; Delledonne, Massimo; Calder('(o))n, Luciano
Haematococcus lacustris genome assembly and annotation reveal diploid genetic traits and stress-induced gene expression patterns
2024-01-01 Marcolungo, Luca; Bellamoli, Francesco; Cecchin, Michela; Lopatriello, Giulia; Rossato, Marzia; Cosentino, Emanuela; Rombauts, Stephane; Delledonne, Massimo; Ballottari, Matteo
Hybrid genome assembly and annotation of Paenibacillus pasadenensis strain R16 reveals insights on endophytic life style and antifungal activity
2018-01-01 Passera, Alessandro; Marcolungo, Luca; Casati, Paola; Brasca, Milena; Quaglino, Fabio; Cantaloni, Chiara; Delledonne, Massimo
Real-Time On-Site Diagnosis of Quarantine Pathogens in Plant Tissues by Nanopore-Based Sequencing
2022-01-01 Marcolungo, Luca; Passera, Alessandro; Maestri, Simone; Segala, Elena; Alfano, Massimiliano; Gaffuri, Francesca; Marturano, Giovanni; Casati, Paola; Attilio Bianco, Piero; Delledonne, Massimo
Role of phage ϕ1 in two strains of Salmonella Rissen, sensitive and resistant to phage ϕ1
2018-01-01 Papaianni, Marina; Contaldi, Felice; Fulgione, Andrea; Woo, Sheridan L; Casillo, Angela; Corsaro, Maria Michela; Parrilli, Ermenegilda; Marcolungo, Luca; Rossato, Marzia; Delledonne, Massimo; Garonzi, Marianna; Iannelli, Domenico; Capparelli, Rosanna
Shedding light on dark genes: enhanced targeted resequencing by optimizing the combination of enrichment technology and DNA fragment length
2020-01-01 Iadarola, Barbara; Xumerle, Luciano; Lavezzari, Denise; Paterno, Marta; Marcolungo, Luca; Beltrami, Cristina; Fortunati, Elisabetta; Mei, Davide; Vetro, Annalisa; Guerrini, Renzo; Parrini, Elena; Rossato, Marzia; Delledonne, Massimo
Structural Refinement by Direct Mapping Reveals Assembly Inconsistencies near Hi-C Junctions
2023-01-01 Marcolungo, Luca; Vincenzi, Leonardo; Ballottari, Matteo; Cecchin, Michela; Cosentino, Emanuela; Mignani, Thomas; Limongi, Antonina Rita; Ferraris, Irene; Orlandi, Matteo; Rossato, Marzia; Delledonne, Massimo
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| ?Nebbiolo? genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.) | 1-gen-2022 | Maestri, S.; Gambino, G.; Lopatriello, G.; Minio, A.; Perrone, I.; Cosentino, E.; Giovannone, B.; Marcolungo, L.; Alfano, M.; Rombauts, S.; Cantu, D.; Rossato, M.; Delledonne, M.; Calder('o)n, L. | |
| A Long-Read Sequencing Approach for Direct Haplotype Phasing in Clinical Settings | 1-gen-2020 | Maestri, Simone; Maturo, Maria Giovanna; Cosentino, Emanuela; Marcolungo, Luca; Iadarola, Barbara; Fortunati, Elisabetta; Rossato, Marzia; Delledonne, Massimo | |
| A Rapid and Accurate MinION-Based Workflow for Tracking Species Biodiversity in the Field | 1-gen-2019 | Maestri, Simone; Cosentino, Emanuela; Paterno, Marta; Freitag, Hendrik; Garces, Jhoana M; Marcolungo, Luca; Alfano, Massimiliano; Njunjić, Iva; Schilthuizen, Menno; Slik, Ferry; Menegon, Michele; Rossato, Marzia; Delledonne, Massimo | |
| ACoRE: Accurate SARS-CoV-2 genome reconstruction for the characterization of intra-host and inter-host viral diversity in clinical samples and for the evaluation of re-infections | 1-gen-2021 | Marcolungo, Luca; Beltrami, Cristina; Degli Esposti, Chiara; Lopatriello, Giulia; Piubelli, Chiara; Mori, Antonio; Pomari, Elena; Deiana, Michela; Scarso, Salvatore; Bisoffi, Zeno; Grosso, Valentina; Cosentino, Emanuela; Maestri, Simone; Lavezzari, Denise; Iadarola, Barbara; Paterno, Marta; Segala, Elena; Giovannone, Barbara; Gallinaro, Martina; Rossato, Marzia; Delledonne, Massimo | |
| Bioinformatics approaches for hybrid de novo genome assembly | 1-gen-2020 | Marcolungo, Luca | |
| Characterization of FMR1 Repeat Expansion and Intragenic Variants by Indirect Sequence Capture | 1-gen-2021 | Grosso, Valentina; Marcolungo, Luca; Maestri, Simone; Alfano, Massimiliano; Lavezzari, Denise; Iadarola, Barbara; Salviati, Alessandro; Mariotti, Barbara; Botta, Annalisa; D'Apice, Maria Rosaria; Novelli, Giuseppe; Delledonne, Massimo; Rossato, Marzia | |
| Chlorella vulgaris genome assembly and annotation reveals the molecular basis for metabolic acclimation to high light conditions | 1-gen-2019 | Cecchin, Michela; Marcolungo, Luca; Rossato, Marzia; Girolomoni, Laura; Cosentino, Emanuela; Cuine, Stephan; Li‐beisson, Yonghua; Delledonne, Massimo; Ballottari, Matteo | |
| CRISPR-Cas9-based repeat depletion for the high-throughput genotyping of complex plant genomes | 1-gen-2023 | Rossato, Marzia; Marcolungo, Luca; DE ANTONI, Luca; Lopatriello, Giulia; Bellucci, Elisa; Cortinovis, Gaia; Frascarelli, Giulia; Nanni, Laura; Biotcchi, Elena; Di Vittori, Valerio; Vincenzi, Leonardo; Lucchini, Filippo; E Bett, Kirstin; Remsay, Larissa; Konkin, David; Delledonne, Massimo; Papa, Roberto | |
| Genomic dissection of pod shattering in common bean: mutations at non-orthologous loci at the basis of convergent phenotypic evolution under domestication of leguminous species | 1-gen-2019 | Rau, Domenico; Murgia, Maria L; Rodriguez, Monica; Bitocchi, Elena; Bellucci, Elisa; Fois, Davide; Albani, Diego; Nanni, Laura; Gioia, Tania; Santo, Debora; Marcolungo, Luca; Delledonne, Massimo; Attene, Giovanna; Papa, Roberto | |
| Genomic structural variation in Nebbiolo grapevines at the individual, clonal and cultivar levels | 1-gen-2020 | Maestri, Simone; Gambino, Giorgio; Minio, Andrea; Perrone, Irene; Cosentino, Emanuela; Giovannone, Barbara; Lopatriello, Giulia; Marcolungo, Luca; Cantu, Dario; Rossato, Marzia; Delledonne, Massimo; Calder('(o))n, Luciano | |
| Haematococcus lacustris genome assembly and annotation reveal diploid genetic traits and stress-induced gene expression patterns | 1-gen-2024 | Marcolungo, Luca; Bellamoli, Francesco; Cecchin, Michela; Lopatriello, Giulia; Rossato, Marzia; Cosentino, Emanuela; Rombauts, Stephane; Delledonne, Massimo; Ballottari, Matteo | |
| Hybrid genome assembly and annotation of Paenibacillus pasadenensis strain R16 reveals insights on endophytic life style and antifungal activity | 1-gen-2018 | Passera, Alessandro; Marcolungo, Luca; Casati, Paola; Brasca, Milena; Quaglino, Fabio; Cantaloni, Chiara; Delledonne, Massimo | |
| Real-Time On-Site Diagnosis of Quarantine Pathogens in Plant Tissues by Nanopore-Based Sequencing | 1-gen-2022 | Marcolungo, Luca; Passera, Alessandro; Maestri, Simone; Segala, Elena; Alfano, Massimiliano; Gaffuri, Francesca; Marturano, Giovanni; Casati, Paola; Attilio Bianco, Piero; Delledonne, Massimo | |
| Role of phage ϕ1 in two strains of Salmonella Rissen, sensitive and resistant to phage ϕ1 | 1-gen-2018 | Papaianni, Marina; Contaldi, Felice; Fulgione, Andrea; Woo, Sheridan L; Casillo, Angela; Corsaro, Maria Michela; Parrilli, Ermenegilda; Marcolungo, Luca; Rossato, Marzia; Delledonne, Massimo; Garonzi, Marianna; Iannelli, Domenico; Capparelli, Rosanna | |
| Shedding light on dark genes: enhanced targeted resequencing by optimizing the combination of enrichment technology and DNA fragment length | 1-gen-2020 | Iadarola, Barbara; Xumerle, Luciano; Lavezzari, Denise; Paterno, Marta; Marcolungo, Luca; Beltrami, Cristina; Fortunati, Elisabetta; Mei, Davide; Vetro, Annalisa; Guerrini, Renzo; Parrini, Elena; Rossato, Marzia; Delledonne, Massimo | |
| Structural Refinement by Direct Mapping Reveals Assembly Inconsistencies near Hi-C Junctions | 1-gen-2023 | Marcolungo, Luca; Vincenzi, Leonardo; Ballottari, Matteo; Cecchin, Michela; Cosentino, Emanuela; Mignani, Thomas; Limongi, Antonina Rita; Ferraris, Irene; Orlandi, Matteo; Rossato, Marzia; Delledonne, Massimo |